The detailed information of tRNA gene sequence


Sequence ID>WENV170360447
Genome IDCETL01105942
Search identical group
Phylum/Class[CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 187
End posion on genome 114
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctccacaaat
tRNA gene sequence 
GTCGTGGTGTCCGAATGGTTAGGTCACGGATTGCAAACCCGTTCATGTGAGTTCGAATCT
CACCCACGACTCAA
Downstream region at tRNA end position 
ggataataga
Secondary structure (Cloverleaf model)
>WENV170360447	Cys	GCA
                   t      TCAA ggataataga
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
        A A        G      | | | | |     G
      T     G C C T       G T G A G     C
      G       | |                   T T
      G     A G G T
        T T        C     TCAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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