The detailed information of tRNA gene sequence


Sequence ID>WENV170361178
Genome IDCETL01308953
Search identical group
Phylum/Class[CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1000
End posion on genome 914
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnnntat
tRNA gene sequence 
GCCGAGGTGGTGAAATTGGTAGACGCGCTGGATTCAAAATCCAGTTCTCTTCGGAGAGTG
TGGGTTCGAGCCCCACCCTCGGTACTA
Downstream region at tRNA end position 
ttgaaatttt
Secondary structure (Cloverleaf model)
>WENV170361178	Leu	CAA
                   t      ACTA ttgaaatttt
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          C G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCTCTTCGGAGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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