The detailed information of tRNA gene sequence


Sequence ID>WENV170366004
Genome IDCETO01022652
Search identical group
Phylum/Class[CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 190
End posion on genome 114
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gccgtcgatc
tRNA gene sequence
CGGGATGTGGCGCAGCCAGGCAGCGCACCTGCTTTGGGAGCAGGGGGTCGGCGGTTCAAA
TCCGCCCATCCCGACCA
Downstream region at tRNA end position
ccgctgccct
Secondary structure (Cloverleaf model)
>WENV170366004	Pro	TGG
                   c      ACCA ccgctgccct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C C G C C     A
      C G A        G      | | | | |     A
    C       C G C G       G G C G G     C
    A       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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