The detailed information of tRNA gene sequence


Sequence ID>WENV170366082
Genome IDCETO01030716
Search identical group
Phylum/Class[CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 713
End posion on genome 799
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
gcaaccaata
tRNA gene sequence
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATTCCATGTTCGCAAGAACACG
GGGGTTCGAATCCCCCTCCCCGCGCCT
Downstream region at tRNA end position
tttacaagta
Secondary structure (Cloverleaf model)
>WENV170366082	Ser	GCT
                   a      GCCT tttacaagta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACAC
                    T - A
                    G - C
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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