The detailed information of tRNA gene sequence


Sequence ID>WENV170369943
Genome IDCETR01049034
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 319
End posion on genome 230
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaacaaaaa
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGCGTGTATAGGTTTATCCCTA
TCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
ctaattctga
Secondary structure (Cloverleaf model)
>WENV170369943	Ser	GGA
                   a      GCCA ctaattctga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATAGGTTTATCCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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