The detailed information of tRNA gene sequence


Sequence ID>WENV170370221
Genome IDCETR01077031
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 819
End posion on genome 733
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
gatgttttat
tRNA gene sequence
GGAGAGATGGCCGAGTTGGTAAGGCAGCGCCCTGCTAAGGCGTACAACCGTAAGGTTGCG
AGGGTTCGAGTCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
gttttgtgct
Secondary structure (Cloverleaf model)
>WENV170370221	Ser	GCT
                   t      GCCA gttttgtgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T G A        G      | | | | |     G
    T       G C C G       G A G G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     ACAACCGTAAGGTTGC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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