The detailed information of tRNA gene sequence


Sequence ID>WENV170371212
Genome IDCETR01263312
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 539
End posion on genome 610
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
ttctattaaa
tRNA gene sequence
GTTCCATTCTTCTAATGGTAGGAATCCTTCTTTTCGCGAAGGCAATATCGGTTCAATTCC
GGTATGGAATGCtt
Downstream region at tRNA end position
atatataaaa
Secondary structure (Cloverleaf model)
>WENV170371212	Glu	TTC
                   a      GCtt atatataaaa
                     G + T
                     T - A
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T G G C C     A
        A A        C      | + | | |     A
      T     T C T T       A T C G G     C
      G     + | | |                 T T
      G     G G A A
        T A        T     CAAT
                    C - G
                    C - G
                    T - A
                    T - A
                    C - G
                  T       C
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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