The detailed information of tRNA gene sequence


Sequence ID>WENV170371592
Genome IDCETS01022786
Search identical group
Phylum/Class[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 178
End posion on genome 265
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatcatttac
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGACGATTGCGATGGTCTTGAAAACCATTGATCCTCACGGATCC
GCGGGTTCAAATCCCGCACCCTCCGCCA
Downstream region at tRNA end position 
tcagttttta
Secondary structure (Cloverleaf model)
>WENV170371592	Ser	TGA
                   c      GCCA tcagttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G C G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGATCCTCACGGATCC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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