The detailed information of tRNA gene sequence


Sequence ID>WENV170375710
Genome IDCETU01012808
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 619
End posion on genome 695
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgcagcagaa
tRNA gene sequence
GGGCCTGTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCTCGGTTCAAG
TCCGAGCAGGCCCACCA
Downstream region at tRNA end position
tctctgtttt
Secondary structure (Cloverleaf model)
>WENV170375710	Met	CAT
                   a      ACCA tctctgtttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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