The detailed information of tRNA gene sequence


Sequence ID>WENV170376928
Genome IDCETU01112887
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 225
End posion on genome 301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgaatttgat
tRNA gene sequence
GGCGGGGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCAAT
TCCACTTCCCGCTACCA
Downstream region at tRNA end position
aaagcaacaa
Secondary structure (Cloverleaf model)
>WENV170376928	Met	CAT
                   t      ACCA aaagcaacaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     T C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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