The detailed information of tRNA gene sequence


Sequence ID>WENV170378134
Genome IDCETU01341672
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 186
End posion on genome 95
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttttaaac
tRNA gene sequence 
GGAGAGGTGGCAGAGCCTGGCTGAATGCGCCGCACTCGAAATGCGGTTTTGGGGCAACTC
AAACGGGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
tatgcagttt
Secondary structure (Cloverleaf model)
>WENV170378134	Ser	CGA
                   c      GCAA tatgcagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TTTTGGGGCAACTCAAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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