The detailed information of tRNA gene sequence


Sequence ID>WENV170378164
Genome IDCETU01343929
Search identical group
Phylum/Class[CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 397
End posion on genome 468
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
agatactata
tRNA gene sequence
AAGGGATTAGCTTAATGGTAGAGCAACCGTTTTACACACGGTAGGTTAGGTGTTCAAGTC
ACCTATTCCTTAatc
Downstream region at tRNA end position
cttaatgtat
Secondary structure (Cloverleaf model)
>WENV170378164	Val	TAC
                   a      Aatc cttaatgtat
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A          T G
                    T     T C C A C     A
        A A        A      | | | | |     A
      T     T T C G       A G G T G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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