The detailed information of tRNA gene sequence


Sequence ID>WENV170379062
Genome IDCETV01086082
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 245
End posion on genome 169
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gactcttcgt
tRNA gene sequence
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAACCCCCGCCACTA
Downstream region at tRNA end position
cacggaaacc
Secondary structure (Cloverleaf model)
>WENV170379062	Met	CAT
                   t      ACTA cacggaaacc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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