The detailed information of tRNA gene sequence


Sequence ID>WENV170379261
Genome IDCETV01110544
Search identical group
Phylum/Class[CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 491
End posion on genome 408
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
tttaagcttt
tRNA gene sequence 
GGCACCATGGCCGAGTGGTTAAGGCGGTAGATTAGAAATCTACTGGGAATTCTCCCGCGG
AAGTTCGAATCTTCCTGGTGTCGCtt
Downstream region at tRNA end position 
ttgagggttg
Secondary structure (Cloverleaf model)
>WENV170379261	Ser	AGA
                   t      GCtt ttgagggttg
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     C C T T C     A
      T G A        G      | | | | |     G
    G       G C C G       G G A A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGAATTCTCCCGC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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