The detailed information of tRNA gene sequence


Sequence ID>WENV170381072
Genome IDCETW01116819
Search identical group
Phylum/Class[CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 157
End posion on genome 233
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tatgagatat
tRNA gene sequence
GGGGGATTAGCTCAATAGGTTAGAGCAACTGACTCATAATCAGTAGGTTCTAGGTTCAAG
TCCTAGATCCCCTACCA
Downstream region at tRNA end position
actcgacctg
Secondary structure (Cloverleaf model)
>WENV170381072	Met	CAT
                   t      ACCA actcgacctg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     G A T C C     A
      T A A        A      | | | | |     A
    A       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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