The detailed information of tRNA gene sequence


Sequence ID>WENV170382226
Genome IDCETX01003495
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 169
End posion on genome 98
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ttttatgtga
tRNA gene sequence
TCCTGGTTGGTGTAGTTGGTAACATTTCTGCCTGTCACGCAGACGCCCGGGGTTCGATTC
CCCGACTAGGAGttc
Downstream region at tRNA end position
tttttctttc
Secondary structure (Cloverleaf model)
>WENV170382226	Asp	GTC
                   a      Gttc tttttctttc
                     T - A
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     T - A          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     CGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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