The detailed information of tRNA gene sequence


Sequence ID>WENV170382434
Genome IDCETX01015375
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 229
End posion on genome 138
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttttattt
tRNA gene sequence 
GGAGCGATGGCTGAGTCTGGTTAAAGGCACCCGGCTTGAAACCGGGAGATCGTGCAAGCG
ATCCGTGGGTTCGAATCCTACTCGCTCCGCCA
Downstream region at tRNA end position 
ctaactaatt
Secondary structure (Cloverleaf model)
>WENV170382434	Ser	TGA
                   t      GCCA ctaactaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C A T C C     A
    C T G A        G      | | + | |     G
  T         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T A A        A     AGATCGTGCAAGCGATCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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