The detailed information of tRNA gene sequence


Sequence ID>WENV170384098
Genome IDCETX01223875
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 292
End posion on genome 366
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ccaaaatttT
tRNA gene sequence
GGGGATGTAGCATAATCTGGTAGTGCGGCTGGCTCCAGACCAGTTGATTCGGGTTCAAAT
CCCGCCATCCCCATtc
Downstream region at tRNA end position
ccgcttcgaa
Secondary structure (Cloverleaf model)
>WENV170384098	Trp	CCA
                   T      ATtc ccgcttcgaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C C C     A
      T A A        A        | | | |     A
    C       T A C G       T C G G G     C
    T       + | | |                 T T
    G       G T G C
      G T A        G     TGAT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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