The detailed information of tRNA gene sequence


Sequence ID>WENV170384124
Genome IDCETX01229762
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 326
End posion on genome 254
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
taaaccacca
tRNA gene sequence
GGGGGTGTAGTATAACCTGGCATTATAGCCGCCTCCAGAGCGGTAGATCGGGGTTCAAAT
CCCTGCGCCCCCAtta
Downstream region at tRNA end position
tgcagtttga
Secondary structure (Cloverleaf model)
>WENV170384124	Trp	CCA
                   a      Atta tgcagtttga
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      C A A        A      | + | | |     A
    C       T A T G       C G G G G     C
    T         | | +                 T T
    G       T T A T
      G C A        A     AGAT
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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