The detailed information of tRNA gene sequence


Sequence ID>WENV170384188
Genome IDCETX01247613
Search identical group
Phylum/Class[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 528
End posion on genome 455
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
ttttataata
tRNA gene sequence
GTCCGTGTAGCGCAATTGGATAGCGCGTCAGACTTCTAATCTGAAGGTTACGGGTTCGAT
TCCCGTCATGGATAaat
Downstream region at tRNA end position
attttatttt
Secondary structure (Cloverleaf model)
>WENV170384188	Arg	TCT
                   a      Aaat attttatttt
                     G + T
                     T - A
                     C - G
                     C - G
                     G + T
                     T - A
                     G - C          T T
                    T     T G C C C     A
      T A A        A      | | | | |     G
    T       C G C G       A C G G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        G     AGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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