The detailed information of tRNA gene sequence


Sequence ID>WENV170384827
Genome IDCETY01018089
Search identical group
Phylum/Class[CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 234
End posion on genome 160
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attgttattt
tRNA gene sequence 
GGGCGTGTGGTGTAATGGATAGCATTTTGGCCTTCTAAGCCGAAGATACGGGTTCAATTC
CTGTCACGCCCGCCA
Downstream region at tRNA end position 
aaaaccttta
Secondary structure (Cloverleaf model)
>WENV170384827	Arg	TCT
                   t      GCCA aaaaccttta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     T G T C C     A
      T A A        G      | | + | |     A
    G       T G T G       A C G G G     C
    G       + | | +                 T T
    A       G C A T
      T A          T     AGAT
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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