The detailed information of tRNA gene sequence


Sequence ID>WENV170388292
Genome IDCETZ01070012
Search identical group
Phylum/Class[CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1615
End posion on genome 1690
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cagagccaca
tRNA gene sequence
GCCTCATTGGTGTAGTTGGTAGCACGCCAGTCTCATAAGCTGGAGGTCGTCGGTTCAAAT
CCGTCATGAGGCACCA
Downstream region at tRNA end position
ctaatggaca
Secondary structure (Cloverleaf model)
>WENV170388292	Met	CAT
                   a      ACCA ctaatggaca
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     C T G C C     A
      T G A        G      |   | | |     A
    T       T G T G       G T C G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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