The detailed information of tRNA gene sequence


Sequence ID>WENV170390414
Genome IDCEUA01107723
Search identical group
Phylum/Class[CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 316
End posion on genome 241
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
aaaagtattt
tRNA gene sequence
CGGGGTGTAGCGTAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGGAGTTCGA
ATCTCTCCACCCCGACac
Downstream region at tRNA end position
gagggagacc
Secondary structure (Cloverleaf model)
>WENV170390414	Pro	TGG
                   t      ACac gagggagacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
    C T G A        A      | + | | |     G
  C         T G C G       G G G A G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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