The detailed information of tRNA gene sequence


Sequence ID>WENV170390978
Genome IDCEUA01185062
Search identical group
Phylum/Class[CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 336
End posion on genome 263
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcttattT
tRNA gene sequence 
GGCTCATTAGTATAATGGTTAGTACTAGTGCCTGTCTAGCACAAGGACGGAGTTCAATTC
TCCGATGAGCCGTta
Downstream region at tRNA end position 
gagattcatt
Secondary structure (Cloverleaf model)
>WENV170390978	Asp	GTC
                   T      GTta gagattcatt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A          T T
                    T     G C C T C     A
      T A A        A      | | | | |     A
    G       T A T G       C G G A G     C
    G       + | | |                 T T
    T       G T A C
      T A          T     AGGA
                    A   A
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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