The detailed information of tRNA gene sequence


Sequence ID>WENV170396278
Genome IDCEUC01242912
Search identical group
Phylum/Class[CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 542
End posion on genome 631
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actattatat
tRNA gene sequence 
GGAAGAGTGGCAGAGAGGTTTAATGCGGCACACTGCTAATGTGTTTATCTCATCTATGGG
ATACGAAGGTTCGAATCCTTCCTCTTCCGCag
Downstream region at tRNA end position 
taaaaaaaag
Secondary structure (Cloverleaf model)
>WENV170396278	Ser	GCT
                   t      GCag taaaaaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G A C G       G A A G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TTATCTCATCTATGGGATAC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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