The detailed information of tRNA gene sequence


Sequence ID>WENV170396540
Genome IDCEUC01309226
Search identical group
Phylum/Class[CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3
End posion on genome 94
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
nnnnnnnntt
tRNA gene sequence
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCCCGCCTGCTAAGTGGGTGTAGGGCTTAACAC
TCTACCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position
ttaaagtcag
Secondary structure (Cloverleaf model)
>WENV170396540	Ser	GCT
                   t      GCtc ttaaagtcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTAGGGCTTAACACTCTACC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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