The detailed information of tRNA gene sequence


Sequence ID>WENV170397134
Genome IDCEUD01028613
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 541
End posion on genome 448
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacatagaa
tRNA gene sequence 
GGAGAGTTGGGTGAGTTTGGTTTAAACCAGCAGGTTGCTAACTTGTCGTGCGTCGAAAGA
TGTACCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
ttagtataaa
Secondary structure (Cloverleaf model)
>WENV170397134	Ser	GCT
                   a      GCCA ttagtataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  T         G T G G       G T G G G     C
  G           | | |                 T T
  G         A A C C
    T T T A        A     CGTGCGTCGAAAGATGTACC
                    G + T
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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