The detailed information of tRNA gene sequence


Sequence ID>WENV170397361
Genome IDCEUD01051283
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 182
End posion on genome 92
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atatggatat
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGATGGTGCCGCTCTCGAAAAGCGGTCTCCGTTTTTAGCGG
AGCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttgtaatta
Secondary structure (Cloverleaf model)
>WENV170397361	Ser	CGA
                   t      GCCA gttgtaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TCTCCGTTTTTAGCGGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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