The detailed information of tRNA gene sequence


Sequence ID>WENV170398260
Genome IDCEUD01133236
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 421
End posion on genome 492
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataatctaa
tRNA gene sequence 
GGGAGTATATTTCAACGGTTAGAATCTCTCGCTCCAGACGAGAGGATGCCGGTTCGATTC
CGGCTGCTCCCAttt
Downstream region at tRNA end position 
taatttattt
Secondary structure (Cloverleaf model)
>WENV170398260	Trp	CCA
                   a      Attt taatttattt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T T
                    T     C G G C C     A
      C A A        A      | | | | |     G
    G       C T T T       G C C G G     C
    G       | | |                   T T
    T       G A A T
      T A          C     GGAT
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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