The detailed information of tRNA gene sequence


Sequence ID>WENV170398381
Genome IDCEUD01190506
Search identical group
Phylum/Class[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8
End posion on genome 84
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
nnncagaatt
tRNA gene sequence
GGCCCCGTGGTGTAGCGGTCTAACATAACGCCCTGTCACGGCGTAGATCGGGGGTTCGAA
TCCCCCCGGGGTCGCCA
Downstream region at tRNA end position
atattttagt
Secondary structure (Cloverleaf model)
>WENV170398381	Asp	GTC
                   t      GCCA atattttagt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       T G T G       G G G G G     C
    G       | | | +                 T T
    T       A C A T
      C T A        A     AGATC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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