The detailed information of tRNA gene sequence


Sequence ID>WENV170401361
Genome IDCEUE01223494
Search identical group
Phylum/Class[CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 209
End posion on genome 285
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttataatgat
tRNA gene sequence
GGTGGAGTAGAGCAGTTCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAATGGTTCGAA
TCCATTCTCCGCTACAA
Downstream region at tRNA end position
acataatttt
Secondary structure (Cloverleaf model)
>WENV170401361	Met	CAT
                   t      ACAA acataatttt
                     G + T
                     G - C
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | | | | |     G
    T       C G A G       A A T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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