The detailed information of tRNA gene sequence


Sequence ID>WENV170403226
Genome IDCEUF01051320
Search identical group
Phylum/Class[CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1125
End posion on genome 1201
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgtacctcgg
tRNA gene sequence
GGACCCGTAGCTCAGTTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCATCGGTTCAAA
TCCGGTCGGGTCCACCA
Downstream region at tRNA end position
tcgattacga
Secondary structure (Cloverleaf model)
>WENV170403226	Met	CAT
                   g      ACCA tcgattacga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | + | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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