The detailed information of tRNA gene sequence


Sequence ID>WENV170404939
Genome IDCEUG01046008
Search identical group
Phylum/Class[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 544
End posion on genome 468
Amino Acid Stop
Anticodon TTA
Upstream region at tRNA start position
ccacagttga
tRNA gene sequence
GGGCGCTTAGCTCAGTTGGTTCAGAGCACTTGGGTTTACACCCAAGGGGTCGGGGGTTCG
AATCCCTCAGCGCCCACat
Downstream region at tRNA end position
ttcataatcc
Secondary structure (Cloverleaf model)
>WENV170404939	Stop	TTA
                   a      ACat ttcataatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
    T T G A        A      | + | | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGGTC
                    C   A
                    T - A
                    T   C
                    G - C
                    G - C
                  G       A
                  T       C
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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