The detailed information of tRNA gene sequence


Sequence ID>WENV170405511
Genome IDCEUG01102761
Search identical group
Phylum/Class[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 845
End posion on genome 770
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttttcat
tRNA gene sequence 
GGGGGCGTAGCTTAGCTGGCCCAAAGCATACGACTCATAATCGTGAGATCGTCGGTTCGA
ATCCGACCGCCCCTACtt
Downstream region at tRNA end position 
ttcaggcacg
Secondary structure (Cloverleaf model)
>WENV170405511	Met	CAT
                   t      ACtt ttcaggcacg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A G C C     A
    T C G A        A      | | | | |     G
  G         T T C G       G T C G G     C
  G         | | | |                 T T
  C         A A G C
    C C A          A     AGATC
                    T + G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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