The detailed information of tRNA gene sequence


Sequence ID>WENV170408398
Genome IDCEUI01022788
Search identical group
Phylum/Class[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4092
End posion on genome 4167
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgccaaccaa
tRNA gene sequence
GGGCTTCTAGCACAATGGTTAGTGCATCCGGCTCATAACCGGACGGTTTTCGGTTCGAGT
CCGAAGGGGCCCACCA
Downstream region at tRNA end position
aaaggagaat
Secondary structure (Cloverleaf model)
>WENV170408398	Met	CAT
                   a      ACCA aaaggagaat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T + G
                     C - G          T G
                    T     A A G C C     A
      T A A        A      | | | | |     G
    G       C A C G       T T C G G     C
    G       | | | |                 T T
    T       G T G C
      T A          A     CGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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