The detailed information of tRNA gene sequence


Sequence ID>WENV170410483
Genome IDCEUJ01106333
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 25
End posion on genome 109
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
tatatatagT
tRNA gene sequence
GACATTGTGCCCGAGTGGTTAAGGGGATGGACTTGAAATCCATTGGGCATCGCCCGCGCG
AGTTCAAATCTCGTCGATGTCGTCt
Downstream region at tRNA end position
atatatttta
Secondary structure (Cloverleaf model)
>WENV170410483	Ser	TGA
                   T      GTCt atatatttta
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      + | | | |     A
    G       G C C C       G C G A G     C
    G         | | |                 T T
    T       A G G G
      T A          G     TGGGCATCGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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