The detailed information of tRNA gene sequence


Sequence ID>WENV170411256
Genome IDCEUJ01170039
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 107
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aaagatttat
tRNA gene sequence
GGGCTTTTAGTTCAGTTGGTTAGAACACCCGGCTCATAACCGGATGGTCGTGGGTTCAAG
TCCCACAGAGCCCACCA
Downstream region at tRNA end position
tcacacagga
Secondary structure (Cloverleaf model)
>WENV170411256	Met	CAT
                   t      ACCA tcacacagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T + G
                     T - A          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        A     TGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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