The detailed information of tRNA gene sequence


Sequence ID>WENV170413115
Genome IDCEUK01080427
Search identical group
Phylum/Class[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 427
End posion on genome 500
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacagaatac
tRNA gene sequence 
TGCGATGAAGTTCACGAGGTAGAATAGGCGGTTCATATCCGCAAGGTTGTTGGTTCGAAT
CCAGCCATCGCAACgt
Downstream region at tRNA end position 
tttaaatgag
Secondary structure (Cloverleaf model)
>WENV170413115	Met	CAT
                   c      ACgt tttaaatgag
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    A     C G A C C     A
      G C A        A      | + | | |     G
    A       C T T G       G T T G G     C
    G       | | | +                 T T
    G       G A A T
      T A          A     AGGTT
                    G   A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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