The detailed information of tRNA gene sequence


Sequence ID>WENV170417630
Genome IDCEUL01371573
Search identical group
Phylum/Class[CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 304
End posion on genome 378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
tgtttatggc
tRNA gene sequence
GGAGCGGTAGTTCAGTTGGTTAGAATATCCGCCTGTCACGCGGGAGGTCGCGGGTTCAAG
TCCCGTCCGCTCCGCac
Downstream region at tRNA end position
taaatatttt
Secondary structure (Cloverleaf model)
>WENV170417630	Asp	GTC
                   c      GCac taaatatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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