The detailed information of tRNA gene sequence


Sequence ID>WENV170417825
Genome IDCEUM01005056
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 83
End posion on genome 7
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
agaggccaaa
tRNA gene sequence
CGGGGTGTGGCCTAGTCTGGTAAGGCGCCTGCTTTGGGAGCAGGAGATCGTAGGTTCGAA
TCCTACCGCCCCGACCA
Downstream region at tRNA end position
aaaaaannnn
Secondary structure (Cloverleaf model)
>WENV170417825	Pro	TGG
                   a      ACCA aaaaaannnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       T C C G       G T A G G     C
    T       | | | |                 T T
    G       A G G C
      G T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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