The detailed information of tRNA gene sequence


Sequence ID>WENV170419073
Genome IDCEUM01093606
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 27
End posion on genome 103
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttaagagt
tRNA gene sequence 
tGAAAGTTTAGTTTAATGGTTTAAAACATTGAATTTCAAATTCAAAGATTAAAGGTTCAA
CTCCTTTAACTTTTGCAAc
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170419073	SeC	TCA
                   t      CAAc tttttatttt
                     t + G
                     G + T
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A
                     T - A          T C
                    T     T T T C C     A
      T A A        A      | | | | |     A
    G       T T T G       A A A G G     C
    G       | | | |                 T T
    T       A A A C
      T T A        A     AGATT
                    T - A
                    T - A
                    G - C
                    A - T
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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