The detailed information of tRNA gene sequence


Sequence ID>WENV170419536
Genome IDCEUM01131311
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 626
End posion on genome 550
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gcagtaccat
tRNA gene sequence
GGGCCTGTAGCTTAGTTGGTTAGAGCACCCGGCTCATAACCGGGCGGTCAAGGGTTCAAA
TCCCTTCAGGCCCACTA
Downstream region at tRNA end position
ttttcgaact
Secondary structure (Cloverleaf model)
>WENV170419536	Met	CAT
                   t      ACTA ttttcgaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    G       + | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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