The detailed information of tRNA gene sequence


Sequence ID>WENV170423111
Genome IDCEUN01309107
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 291
End posion on genome 215
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
aagtaagata
tRNA gene sequence
GGTCGATTAGCTCAGATGGTTAGAGTGCCACGTTGACATCGTGGAGGTCATTGGTTCAAT
TCCAATATCGACCACAA
Downstream region at tRNA end position
aaataattat
Secondary structure (Cloverleaf model)
>WENV170423111	Val	GAC
                   a      ACAA aaataattat
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     T A A C C     A
      A G A        A      | | | | |     A
    T       C T C G       A T T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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