The detailed information of tRNA gene sequence


Sequence ID>WENV170424228
Genome IDCEUO01087351
Search identical group
Phylum/Class[CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1809
End posion on genome 1734
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aacatcatga
tRNA gene sequence
GGGAGTGTAGCTCAATGGTTAGAGCAAGCGACTCATAATCGTTTGGTTGTGGGTTCAAAT
CCCGCCGCTCCCACCA
Downstream region at tRNA end position
acaatctatt
Secondary structure (Cloverleaf model)
>WENV170424228	Met	CAT
                   a      ACCA acaatctatt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
      T A A        A      | + | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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