The detailed information of tRNA gene sequence


Sequence ID>WENV170424659
Genome IDCEUP01002322
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 250
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttctccaaca
tRNA gene sequence 
GACTCTGTGGCGCAACGGTAGCGCGTCCGACTCCAGATCGGAAGGCTGCGTGTTCAAATC
ACGTCAGGGTCAata
Downstream region at tRNA end position 
gtcttttttg
Secondary structure (Cloverleaf model)
>WENV170424659	Trp	CCA
                   a      Aata gtcttttttg
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C A C     A
        A A        G      + | | | |     A
      C     C G C G       G C G T G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGCT
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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