The detailed information of tRNA gene sequence


Sequence ID>WENV170424700
Genome IDCEUP01004451
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 109
End posion on genome 182
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aacattaagA
tRNA gene sequence
GGGGATATAGCTCAGTGGTAGAGCATCCGGCTGCAGTCCGGCAGGTCCTTGGTTCAACTC
CGAGTGTCCCCTAtg
Downstream region at tRNA end position
atgaagtttt
Secondary structure (Cloverleaf model)
>WENV170424700	Cys	GCA
                   A      TAtg atgaagtttt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     A - T          T C
                    T     G A G C C     A
        G A        A      | | + | |     A
      T     C T C G       C T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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