The detailed information of tRNA gene sequence


Sequence ID>WENV170425100
Genome IDCEUP01043442
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 131
End posion on genome 56
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggacatataa
tRNA gene sequence 
GAGGGAGTAGTTCAGTTGGTAGAATAGTAGCCTTCAAAGCTATCGGTCGCGGGTTCAAAT
CCTGCCTCCCTTGCCA
Downstream region at tRNA end position 
taagcaggcg
Secondary structure (Cloverleaf model)
>WENV170425100	SeC	TCA
                   a      GCCA taagcaggcg
                     G + T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T A          A     CGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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