The detailed information of tRNA gene sequence


Sequence ID>WENV170425227
Genome IDCEUP01049631
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3261
End posion on genome 3350
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttattgctt
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGACGATTGCGACGGTCTTGAAAACCGTTAGGCCCGTAAGGGTC
TCGGAGGTTCGAATCCTCTCCCCTCCGCCA
Downstream region at tRNA end position 
gggttatatt
Secondary structure (Cloverleaf model)
>WENV170425227	Ser	TGA
                   t      GCCA gggttatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G A C G       G G A G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TAGGCCCGTAAGGGTCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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