The detailed information of tRNA gene sequence


Sequence ID>WENV170425363
Genome IDCEUP01088104
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 48
End posion on genome 119
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position
cccttaaaag
tRNA gene sequence
GGGCCTGTAGTTCAACGGATAGAACGGTGGTTTCCGGTACCACAGATCGGGGTTCGATTC
CCTGCGGGCCTAttg
Downstream region at tRNA end position
ggtgttcggt
Secondary structure (Cloverleaf model)
>WENV170425363	Arg	CCG
                   g      Attg ggtgttcggt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     G T C C C     A
      C A A        A      | + | | |     G
    G       C T T G       C G G G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AGAT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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