The detailed information of tRNA gene sequence


Sequence ID>WENV170425411
Genome IDCEUP01097890
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1021
End posion on genome 1097
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgatttatta
tRNA gene sequence 
GGGCGCTTAGCTCAGTCTGGCAGAGCGCTTCCCTTACAAGGAAGAAGTCAGAGGTTCAAA
TCCTCTAGCGCCCACAA
Downstream region at tRNA end position 
gggtttttca
Secondary structure (Cloverleaf model)
>WENV170425411	Val	TAC
                   a      ACAA gggtttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     T C T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A G A G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AAGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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